/* -*- mia-c++  -*-
 *
 * This file is part of MIA - a toolbox for medical image analysis 
 * Copyright (c) Leipzig, Madrid 1999-2016 Gert Wollny
 *
 * MIA is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with MIA; if not, see <http://www.gnu.org/licenses/>.
 *
 */

#ifndef mia_2d_seriesstats_hh
#define mia_2d_seriesstats_hh


#include <mia/core/filter.hh>

NS_MIA_BEGIN

/**
   \ingroup misc 
   \brief data structure to store te results of a statistical analyis of images 
 */
struct SIntensityStats {
	/// Sum of all values 
	double sum; 
	/// Sum of the squares of all values 
	double sumsq; 
	/// mean of all values 
	double mean; 
	/// variation of the values 
	double variation; 
	/// minimum value 
	double min; 
	/// masimum values 
	double max; 
	/// number of values 
	size_t n; 
}; 

/**
   \ingroup misc 
   \brief Functor to accumulate statistics of data. 
   
   This functior is used to accumulate the statistics over the data various 
   containers or images. 

 */

class EXPORT_CORE FIntensityStatsAccumulator : public TFilter<void> {
public: 
	FIntensityStatsAccumulator(); 
	
	/**
	   This function gets called for each entity from the input that the statistics is 
	   evaluated for. 
	   \param data the data container to be processed
	 */
	template <typename Container> 
	void operator () ( const Container& data); 
	

	/**
	   Evaluate the statistics and return it 
	   \returns the statistical measures of the accumulated data 
	 */
	const SIntensityStats& get_result() const; 
private: 
	mutable SIntensityStats m_stats; 
	mutable bool m_stats_valid; 
};  

template <typename Container> 
void FIntensityStatsAccumulator::operator () ( const Container& data)
{
	m_stats_valid = false; 
	m_stats.n += data.size(); 
	for (auto i = data.begin(); i != data.end(); ++i) {
		m_stats.sum += *i; 
		m_stats.sumsq += *i * *i; 
		if (m_stats.min > *i) 
			m_stats.min = *i; 
		if (m_stats.max < *i) 
			m_stats.max = *i; 
	}
}

NS_MIA_END

#endif
